PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G382100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 545aa    MW: 58612.1 Da    PI: 6.5734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G382100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.46e-09356404355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L+el+P +    sk   Ka +L + ++Y++sLq
  Aqcoe3G382100.1.p 356 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 404
                        58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.77E-17351422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.49E-11351408No hitNo description
PROSITE profilePS5088815.459353403IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-16354420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-6356404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-10359409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MDLGDKDKFG IQKRGVDSLN YHSPNVSSDW RFGDSNQPLG LVTAENSAPI SKGDLMGTSM  60
VDSFWDHPNS QNLGFIDNNV HQVGTSTSNT VIRKGVPVTL RTGIENSMDM GWNSPNLMLR  120
GGAFLQSNAR NLPPSLSEFP ADSAFIERAA RFSCFNGGNF GDIVNPFNIS ESLNPYSKGR  180
GPVQGPQEVL SANGMSSLLA AESQKSELNM AEMSKDHSMS VEHGATGGSP VKNDIEKRGQ  240
IGMSSNESGE GEFSGGGQGE HSIPENDGGE PSSSKGISTK KRKRAAQNAE IDQDKGASQH  300
SGEAKADDKS KEKGGQNINS ATNKSAGKHG KDVSQASDAP KEDYIHIRAR RGQATNSHSL  360
AERVRREKIS ERMKFLQELV PGCSKVTGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPR  420
LDFNIEGILG KDVLQSRSGP STLGFSPDMS MVHPQMHPSQ QALLQTGIPG VGNSSDALRR  480
TINSQLAALN SGYKDLMPQN HQQIATGWDD ELHNVVQMGF GTNGPFNNQD LNGPLPPGHM  540
KVEL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261463.10.0PREDICTED: transcription factor bHLH49
RefseqXP_010261471.10.0PREDICTED: transcription factor bHLH49
RefseqXP_010261481.10.0PREDICTED: transcription factor bHLH49
TrEMBLB9HWS90.0B9HWS9_POPTR; Basic helix-loop-helix family protein
STRINGPOPTR_0010s14600.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-111bHLH family protein